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[Methods in Molecular Biology] Genome-Wide Association Studies and Genomic Prediction Volume 1019 || Using PLINK for Genome-Wide Association Studies (GWAS) and Data Analysis

Gondro, Cedric, van der Werf, Julius, Hayes, Ben

Année:

2013

Langue:

english

Fichier:

PDF, 553 KB

english, 2013

[Methods in Molecular Biology] Genome-Wide Association Studies and Genomic Prediction Volume 1019 || Implementing a QTL Detection Study (GWAS) Using Genomic Prediction Methodology

Gondro, Cedric, van der Werf, Julius, Hayes, Ben

Année:

2013

Langue:

english

Fichier:

PDF, 205 KB

english, 2013

[Methods in Molecular Biology] Genome-Wide Association Studies and Genomic Prediction Volume 1019 || Genomic Best Linear Unbiased Prediction (gBLUP) for the Estimation of Genomic Breeding Values

Gondro, Cedric, van der Werf, Julius, Hayes, Ben

Année:

2013

Langue:

english

Fichier:

PDF, 117 KB

english, 2013

[Methods in Molecular Biology] Genome-Wide Association Studies and Genomic Prediction Volume 1019 || Overview of Statistical Methods for Genome-Wide Association Studies (GWAS)

Gondro, Cedric, van der Werf, Julius, Hayes, Ben

Année:

2013

Langue:

english

Fichier:

PDF, 302 KB

english, 2013

Genome wide QTL mapping to identify candidate genes for carcass traits in Hanwoo (Korean Cattle)

Seung Hwan Lee, Julius van der Werf, Sang Hong Lee, Da Jeong Lim, Eung Woo Park, Cedric Gondro, Duhak Yoon, Sung Jong Oh, Oun Hyun Kim, John Gibson, John Thompson

Journal:

Genes & Genomics

Année:

2012

Langue:

english

Fichier:

PDF, 307 KB

english, 2012

[Methods in Molecular Biology] Genome-Wide Association Studies and Genomic Prediction Volume 1019 || Designing a GWAS: Power, Sample Size, and Data Structure

Gondro, Cedric, van der Werf, Julius, Hayes, Ben

Année:

2013

Langue:

english

Fichier:

PDF, 492 KB

english, 2013

[Methods in Molecular Biology] Genome-Wide Association Studies and Genomic Prediction Volume 1019 || Genome-Enabled Prediction Using the BLR (Bayesian Linear Regression) R-Package

Gondro, Cedric, van der Werf, Julius, Hayes, Ben

Année:

2013

Langue:

english

Fichier:

PDF, 2.02 MB

english, 2013

[Methods in Molecular Biology] Genome-Wide Association Studies and Genomic Prediction Volume 1019 ||

Gondro, Cedric, van der Werf, Julius, Hayes, Ben

Année:

2013

Langue:

english

Fichier:

PDF, 14.70 MB

english, 2013

Genetic tests for estimating dairy breed proportion and parentage assignment in East African crossbred cattle

Strucken, Eva M., Al-Mamun, Hawlader A., Esquivelzeta-Rabell, Cecilia, Gondro, Cedric, Mwai, Okeyo A., Gibson, John P.

Journal:

Genetics Selection Evolution

Année:

2017

Langue:

english

Fichier:

PDF, 2.72 MB

english, 2017

Genetic architecture of gene expression in ovine skeletal muscle

Lisette JA Kogelman, Keren Byrne, Tony Vuocolo, Nathan S Watson-Haigh, Haja N Kadarmideen, James W Kijas, Hutton V Oddy, Graham E Gardner, Cedric Gondro, Ross L Tellam

Journal:

BMC Genomics

Année:

2011

Langue:

english

Fichier:

PDF, 755 KB

english, 2011

Tick-susceptible Bos taurus cattle display an increased cellular response at the site of larval Rhipicephalus (Boophilus) microplus attachment, compared with tick-resistant Bos indicus cattle

Emily K. Piper, Louise A. Jackson, Helle Bielefeldt-Ohmann, Cedric Gondro, Ala E. Lew-Tabor, Nicholas N. Jonsson

Journal:

International Journal for Parasitology

Année:

2010

Langue:

english

Fichier:

PDF, 412 KB

english, 2010

FunctSNP: an R package to link SNPs to functional knowledge and dbAutoMaker: a suite of Perl scripts to build SNP databases

Stephen J Goodswen, Cedric Gondro, Nathan S Watson-Haigh, Haja N Kadarmideen

Journal:

BMC Bioinformatics

Année:

2010

Langue:

english

Fichier:

PDF, 759 KB

english, 2010

A gene network switch enhances the oxidative capacity of ovine skeletal muscle during late fetal development

Keren Byrne, Tony Vuocolo, Cedric Gondro, Jason D White, Noelle E Cockett, Tracy Hadfield, Christopher A Bidwell, Jolena N Waddell, Ross L Tellam

Journal:

BMC Genomics

Année:

2010

Langue:

english

Fichier:

PDF, 2.04 MB

english, 2010

Comparative microarray analysis ofRhipicephalus (Boophilus) microplusexpression profiles of larvae pre-attachment and feeding adult female stages onBos indicusandBos tauruscattle

Manuel Rodriguez-Valle, Ala Lew-Tabor, Cedric Gondro, Paula Moolhuijzen, Megan Vance, Felix D Guerrero, Matthew Bellgard, Wayne Jorgensen

Journal:

BMC Genomics

Année:

2010

Langue:

english

Fichier:

PDF, 475 KB

english, 2010

Use of a bovine genome array to identify new biological pathways for beef marbling in Hanwoo (Korean Cattle)

Seung-Hwan Lee, Cedric Gondro, Julius van der Werf, Nam-Kuk Kim, Da-jeong Lim, Eung-Woo Park, Sung-Jong Oh, John P Gibson, John M Thompson

Journal:

BMC Genomics

Année:

2010

Langue:

english

Fichier:

PDF, 728 KB

english, 2010

Analysis ofBabesia bovisinfection-induced gene expression changes in larvae from the cattle tick,Rhipicephalus (Boophilus) microplus

Andrew M Heekin, Felix D Guerrero, Kylie G Bendele, Leo Saldivar, Glen A Scoles, Cedric Gondro, Vishvanath Nene, Appolinaire Djikeng, Kelly A Brayton

Journal:

Parasites & Vectors

Année:

2012

Langue:

english

Fichier:

PDF, 298 KB

english, 2012

Adaptation and Fitness in Animal Populations || Some Evolutionary Consequences of Niche Construction with Genotype-Environment Interaction

van der Werf, Julius, Graser, Hans-Ulrich, Frankham, Richard, Gondro, Cedric

Année:

2009

Langue:

english

Fichier:

PDF, 588 KB

english, 2009

Adaptation and Fitness in Animal Populations || Spherical Cows Grazing in Flatland: Constraints to Selection and Adaptation

van der Werf, Julius, Graser, Hans-Ulrich, Frankham, Richard, Gondro, Cedric

Année:

2009

Langue:

english

Fichier:

PDF, 411 KB

english, 2009

Adaptation and Fitness in Animal Populations || Managing Genetic Diversity, Fitness and Adaptation of Farm Animal Genetic Resources

van der Werf, Julius, Graser, Hans-Ulrich, Frankham, Richard, Gondro, Cedric

Année:

2009

Langue:

english

Fichier:

PDF, 633 KB

english, 2009

Gut transcriptome of replete adult female cattle ticks,Rhipicephalus(Boophilus)microplus, feeding upon aBabesia bovis-infected bovine host

Heekin, Andrew M., Guerrero, Felix D., Bendele, Kylie G., Saldivar, Leo, Scoles, Glen A., Dowd, Scot E., Gondro, Cedric, Nene, Vishvanath, Djikeng, Appolinaire, Brayton, Kelly A.

Journal:

Parasitology Research

Année:

2013

Langue:

english

Fichier:

PDF, 340 KB

english, 2013

[Methods in Molecular Biology] Genome-Wide Association Studies and Genomic Prediction Volume 1019 || Statistical Analysis of Genomic Data

Gondro, Cedric, van der Werf, Julius, Hayes, Ben

Année:

2013

Langue:

english

Fichier:

PDF, 1.07 MB

english, 2013

[Methods in Molecular Biology] Genome-Wide Association Studies and Genomic Prediction Volume 1019 || R for Genome-Wide Association Studies

Gondro, Cedric, van der Werf, Julius, Hayes, Ben

Année:

2013

Langue:

english

Fichier:

PDF, 185 KB

english, 2013

[Methods in Molecular Biology] Genome-Wide Association Studies and Genomic Prediction Volume 1019 || Managing Large SNP Datasets with SNPpy

Gondro, Cedric, van der Werf, Julius, Hayes, Ben

Année:

2013

Langue:

english

Fichier:

PDF, 333 KB

english, 2013

[Methods in Molecular Biology] Genome-Wide Association Studies and Genomic Prediction Volume 1019 || Descriptive Statistics of Data: Understanding the Data Set and Phenotypes of Interest

Gondro, Cedric, van der Werf, Julius, Hayes, Ben

Année:

2013

Langue:

english

Fichier:

PDF, 257 KB

english, 2013

[Methods in Molecular Biology] Genome-Wide Association Studies and Genomic Prediction Volume 1019 || Quality Control for Genome-Wide Association Studies

Gondro, Cedric, van der Werf, Julius, Hayes, Ben

Année:

2013

Langue:

english

Fichier:

PDF, 478 KB

english, 2013

[Methods in Molecular Biology] Genome-Wide Association Studies and Genomic Prediction Volume 1019 || Genome-Wide Complex Trait Analysis (GCTA): Methods, Data Analyses, and Interpretations

Gondro, Cedric, van der Werf, Julius, Hayes, Ben

Année:

2013

Langue:

english

Fichier:

PDF, 337 KB

english, 2013

[Methods in Molecular Biology] Genome-Wide Association Studies and Genomic Prediction Volume 1019 || Validation of Genome-Wide Association Studies (GWAS) Results

Gondro, Cedric, van der Werf, Julius, Hayes, Ben

Année:

2013

Langue:

english

Fichier:

PDF, 93 KB

english, 2013

[Methods in Molecular Biology] Genome-Wide Association Studies and Genomic Prediction Volume 1019 || Incorporating Prior Knowledge to Increase the Power of Genome-Wide Association Studies

Gondro, Cedric, van der Werf, Julius, Hayes, Ben

Année:

2013

Langue:

english

Fichier:

PDF, 208 KB

english, 2013

[Methods in Molecular Biology] Genome-Wide Association Studies and Genomic Prediction Volume 1019 || Bayesian Methods Applied to GWAS

Gondro, Cedric, van der Werf, Julius, Hayes, Ben

Année:

2013

Langue:

english

Fichier:

PDF, 6.26 MB

english, 2013

[Methods in Molecular Biology] Genome-Wide Association Studies and Genomic Prediction Volume 1019 || Detecting Regions of Homozygosity to Map the Cause of Recessively Inherited Disease

Gondro, Cedric, van der Werf, Julius, Hayes, Ben

Année:

2013

Langue:

english

Fichier:

PDF, 275 KB

english, 2013

[Methods in Molecular Biology] Genome-Wide Association Studies and Genomic Prediction Volume 1019 || Genotype Imputation to Increase Sample Size in Pedigreed Populations

Gondro, Cedric, van der Werf, Julius, Hayes, Ben

Année:

2013

Langue:

english

Fichier:

PDF, 150 KB

english, 2013

[Methods in Molecular Biology] Genome-Wide Association Studies and Genomic Prediction Volume 1019 || Higher Order Interactions: Detection of Epistasis Using Machine Learning and Evolutionary Computation

Gondro, Cedric, van der Werf, Julius, Hayes, Ben

Année:

2013

Langue:

english

Fichier:

PDF, 203 KB

english, 2013

[Methods in Molecular Biology] Genome-Wide Association Studies and Genomic Prediction Volume 1019 || Epistasis, Complexity, and Multifactor Dimensionality Reduction

Gondro, Cedric, van der Werf, Julius, Hayes, Ben

Année:

2013

Langue:

english

Fichier:

PDF, 158 KB

english, 2013

[Methods in Molecular Biology] Genome-Wide Association Studies and Genomic Prediction Volume 1019 || Detection of Signatures of Selection Using F ST

Gondro, Cedric, van der Werf, Julius, Hayes, Ben

Année:

2013

Langue:

english

Fichier:

PDF, 380 KB

english, 2013

[Methods in Molecular Biology] Genome-Wide Association Studies and Genomic Prediction Volume 1019 || Association Weight Matrix: A Network-Based Approach Towards Functional Genome-Wide Association Studies

Gondro, Cedric, van der Werf, Julius, Hayes, Ben

Année:

2013

Langue:

english

Fichier:

PDF, 116 KB

english, 2013

[Methods in Molecular Biology] Genome-Wide Association Studies and Genomic Prediction Volume 1019 || Genomic Selection in Animal Breeding Programs

Gondro, Cedric, van der Werf, Julius, Hayes, Ben

Année:

2013

Langue:

english

Fichier:

PDF, 206 KB

english, 2013

[Methods in Molecular Biology] Genome-Wide Association Studies and Genomic Prediction Volume 1019 || Genotype Phasing in Populations of Closely Related Individuals

Gondro, Cedric, van der Werf, Julius, Hayes, Ben

Année:

2013

Langue:

english

Fichier:

PDF, 154 KB

english, 2013

[Methods in Molecular Biology] Genome-Wide Association Studies and Genomic Prediction Volume 1019 || Mixed Effects Structural Equation Models and Phenotypic Causal Networks

Gondro, Cedric, van der Werf, Julius, Hayes, Ben

Année:

2013

Langue:

english

Fichier:

PDF, 183 KB

english, 2013

[Methods in Molecular Biology] Genome-Wide Association Studies and Genomic Prediction Volume 1019 || Applications of Multifactor Dimensionality Reduction to Genome-Wide Data Using the R Package ‘MDR’

Gondro, Cedric, van der Werf, Julius, Hayes, Ben

Année:

2013

Langue:

english

Fichier:

PDF, 232 KB

english, 2013

[Methods in Molecular Biology] Genome-Wide Association Studies and Genomic Prediction Volume 1019 || Use of Ancestral Haplotypes in Genome-Wide Association Studies

Gondro, Cedric, van der Werf, Julius, Hayes, Ben

Année:

2013

Langue:

english

Fichier:

PDF, 648 KB

english, 2013

A co-evolving memetic wrapper for prediction of patient outcomes in TCM informatics

Dion Detterer, Paul Kwan, Cedric Gondro

Journal:

Frontiers of Computer Science

Année:

2012

Langue:

english

Fichier:

PDF, 512 KB

english, 2012

Adaptation and Fitness in Animal Populations ||

van der Werf, Julius, Graser, Hans-Ulrich, Frankham, Richard, Gondro, Cedric

Année:

2009

Langue:

english

Fichier:

PDF, 4.10 MB

english, 2009

Adaptation and Fitness in Animal Populations || Drosophila and Selection in Nature: From Laboratory Fitness Components to Field Assessments

van der Werf, Julius, Graser, Hans-Ulrich, Frankham, Richard, Gondro, Cedric

Année:

2009

Langue:

english

Fichier:

PDF, 212 KB

english, 2009

Genomic divergence of zebu and taurine cattle identified through high-density SNP genotyping

Porto-Neto, Laercio R, Sonstegard, Tad S, Liu, George E, Bickhart, Derek M, Da Silva, Marcos VB, Machado, Marco A, Utsunomiya, Yuri T, Garcia, Jose F, Gondro, Cedric, Van Tassell, Curtis P

Journal:

BMC Genomics

Année:

2013

Langue:

english

Fichier:

PDF, 582 KB

english, 2013

The ovarian transcriptome of the cattle tick,Rhipicephalus (Boophilus) microplus, feeding upon a bovine host infected withBabesia bovis

Heekin, Andrew M, Guerrero, Felix D, Bendele, Kylie G, Saldivar, Leo, Scoles, Glen A, Dowd, Scot E, Gondro, Cedric, Nene, Vishvanath, Djikeng, Appolinaire, Brayton, Kelly A

Journal:

Parasites & Vectors

Année:

2013

Langue:

english

Fichier:

PDF, 360 KB

english, 2013

Molecular analyses provide insight into mechanisms underlying sarcopenia and myofibre denervation in old skeletal muscles of mice

Barns, Mitchell, Gondro, Cedric, Tellam, Ross L., Radley-Crabb, Hannah G., Grounds, Miranda D., Shavlakadze, Tea

Journal:

The International Journal of Biochemistry & Cell Biology

Année:

2014

Langue:

english

Fichier:

PDF, 1.89 MB

english, 2014

Mutations in calpastatin and μ-calpain are associated with meat tenderness, flavor and juiciness in Hanwoo (Korean cattle): Molecular modeling of the effects of substitutions in the calpastatin/μ-calpain complex

Lee, Seung-Hwan, Kim, Seung-Chang, Chai, Han-Ha, Cho, Soo-Hyun, Kim, Hyeong-Cheol, Lim, Dajeong, Choi, Bong-Hwan, Dang, Chang-Gwan, Sharma, Aditi, Gondro, Cedric, Yang, Boh-Suk, Hong, Seong-Koo

Journal:

Meat Science

Année:

2014

Langue:

english

Fichier:

PDF, 713 KB

english, 2014

snpqc - an R pipeline for quality control of Illumina SNP genotyping array data

Gondro, Cedric, Porto-Neto, Laercio R., Lee, Seung Hwan

Journal:

Animal Genetics

Année:

2014

Langue:

english

Fichier:

PDF, 212 KB

english, 2014

[IEEE 2006 IEEE Conference on Computer Aided Control System Design, 2006 IEEE International Conference on Control Applications, 2006 IEEE International Symposium on Intelligent Control - Munich, Germany (2006.10.4-2006.10.6)] 2006 IEEE Conference on Computer Aided Control System Design, 2006 IEEE International Conference on Control Applications, 2006 IEEE International Symposium on Intelligent Control - Sensitivity analysis of programmed cell death and implications for crosstalk phenomena during Tumor Necrosis Factor stimulation

Eissing, Thomas, Waldherr, Steffen, Gondro, Cedric, Bullinger, Eric, Sawodny, Oliver, Allgower, Frank, Scheurich, Peter, Sauter, Thomas

Année:

2006

Langue:

english

Fichier:

PDF, 628 KB

english, 2006

Detection of recombination events, haplotype reconstruction and imputation of sires using half-sib SNP genotypes

Ferdosi, Mohammad H, Kinghorn, Brian P, van der Werf, Julius H J, Gondro, Cedric

Journal:

Genetics Selection Evolution

Année:

2014

Langue:

english

Fichier:

PDF, 2.51 MB

english, 2014